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A DNA barcode reference library of French Polynesian shore fishes ArchiMer
Delrieu-trottin, Erwan; Williams, Jeffrey T.; Pitassy, Diane; Driskell, Amy; Hubert, Nicolas; Viviani, Jeremie; Cribb, Thomas H.; Espiau, Benoit; Galzin, Rene; Kulbicki, Michel; De Loma, Thierry Lison; Meyer, Christopher; Mourier, Johann; Mou-tham, Gerard; Parravicini, Valeriano; Plantard, Patrick; Sasal, Pierre; Siu, Gilles; Tolou, Nathalie; Veuille, Michel; Weigt, Lee; Planes, Serge.
The emergence of DNA barcoding and metabarcoding opened new ways to study biological diversity, however, the completion of DNA barcode libraries is fundamental for such approaches to succeed. This dataset is a DNA barcode reference library (fragment of Cytochrome Oxydase I gene) for 2,190 specimens representing at least 540 species of shore fishes collected over 10 years at 154 sites across the four volcanic archipelagos of French Polynesia; the Austral, Gambier, Marquesas and Society Islands, a 5,000,000 km(2) area. At present, 65% of the known shore fish species of these archipelagoes possess a DNA barcode associated with preserved, photographed, tissue sampled and cataloged specimens, and extensive collection locality data. This dataset represents one...
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Ano: 2019 URL: https://archimer.ifremer.fr/doc/00508/61942/66026.pdf
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Juvenile corals underpin coral reef carbonate production after disturbance ArchiMer
Carlot, Jérémy; Kayal, Mohsen; Lenihan, Hunter S.; Brandl, Simon J.; Casey, Jordan M.; Adjeroud, Mehdi; Cardini, Ulisse; Merciere, Alexandre; Espiau, Benoit; Barneche, Diego R.; Rovere, Alessio; Hédouin, Laetitia; Parravicini, Valeriano.
Sea‐level rise is predicted to cause major damage to tropical coastlines. While coral reefs can act as natural barriers for ocean waves, their protection hinges on the ability of scleractinian corals to produce enough calcium carbonate (CaCO3) to keep up with rising sea levels. As a consequence of intensifying disturbances, coral communities are changing rapidly, potentially reducing community‐level CaCO3 production. By combining colony‐level physiology and long‐term monitoring data, we show that reefs recovering from major disturbances can produce 40% more CaCO3 than currently estimated due to the disproportionate contribution of juvenile corals. However, the buffering effect of highly productive juvenile corals is compromised by recruitment failures,...
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Ano: 2021 URL: https://archimer.ifremer.fr/doc/00685/79743/82514.pdf
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Liste des poissons côtiers de Polynésie française ArchiMer
Siu, Gilles; Bacchet, Philippe; Bernardi, Giacomo; Brooks, Andrew J.; Carlot, Jeremy; Causse, Romain; Claudet, Joachim; Clua, Eric; Delrieu-trottin, Erwan; Espiau, Benoit; Harmelin-vivien, Mireille; Keith, Philippe; Lecchini, David; Madi-moussa, Rakamaly; Parravicini, Valeriano; Planes, Serge; Ponsonnet, Cedric; Randall, John E.; Sasal, Pierre; Taquet, Marc; Williams, Jeffrey T.; Galzin, Rene.
On the occasion of the 10th Indo-Pacific Fish Conference (http://ipfc10.criobe.pf/) to be held in Tahiti in October 2017, it seemed timely to update Randall's 1985 list of the fishes known from French Polynesia. Many studies focusing on fishes in this area have been published since 1985, but Randall's list remains the authoritative source. Herein we present an expanded species list of 1,301 fishes now known to occur in French Polynesia and we review the expeditions and information sources responsible for the over 60% increase in the number of known species since the publication of Randall's checklist in 1985. Our list of the fishes known from French Polynesia includes only those species with a reliably verifiable presence in these waters. In cases where...
Tipo: Text Palavras-chave: Coral reef fishes; Deep and Pelagic fishes; Freshwater fishes; French Polynesia; Endemic fishes; Inventory.
Ano: 2017 URL: https://archimer.ifremer.fr/doc/00666/77826/80005.pdf
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Proteinaceous exotoxins of shrimp-pathogenic isolates of Vibrio penaeicida and Vibrio nigripulchritudo ArchiMer
Aguirre-guzman, Gabriel; Labreuche, Yannick; Ansquer, Dominique; Espiau, Benoit; Levy, Peva; Ascencio, Felipe; Saulnier, Denis.
The pathogenicity of two V. penaeicida strains, AM101 and KH-1, with different geographic origin, and V. nigripulchritudo strain AM102, were investigated in juvenile blue shrimp species Litopenaeus stylirostris. Alive bacteria and protein fractions (PFs) obtained from cell-free supernatants (CFS) were used in experimental challenges. Strains AM102, AM101, and KH-1 produced respectively 60, 54 and 12% mortality at 96h after infection using 104 cfu mL-1 of bacterial suspension. Exocellular toxin-like factors were evidenced in CFS from the New Caledonian strains (AM102 and AM101) but not the Japanese strain (KH-1). At 48h post injection of each CFS, mortality rates were respectively 96,98 and 5% when these strains were cultivated at 20°C, whereas only O,16...
Tipo: Text Palavras-chave: Pathogenicity; Exotoxin; Shrimp; Litopenaeus stylirostris; Vibrio nigripulchritudo; Vibrio penaeicida.
Ano: 2003 URL: http://archimer.ifremer.fr/doc/2003/publication-2807.pdf
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Réseau de surveillance des polluants anthropiques dans les lagons de Polynésie française. Rapport final - Septembre 2014. Contrat de projet Etat-Pays ArchiMer
Bernagout, Solene; Bouisset, Patrick; Leclerc, Gael; Rua, Jean; Nohl, Marine; Garen, Pierre; Levy, Peva; Tetaura, Nono-lewis; Poroi, Destremeau; Sham Koua, Manaarii; Liao, Vetea; Bosserelle, Pauline; Planes, Serge; Espiau, Benoit.
La mise en place d’un réseau d’observation de la qualité des eaux lagonaires de Polynésie française, financé par le contrat de projet Etat – Pays, a été initiée mi 2012 pour une durée de deux ans. Durant un à trois semestres la contamination in situ a été suivie sur 6 sites : Vairao et la baie de Phaéton à Tahiti, Moorea (Vaiare), Huahine (Faie), Maupiti et Rangiroa. Le mollusque bioindicateur utilisé est l’huître perlière Pinctada margaritifera. Après transplantation et 4 mois d’immersion sur site, la mesure dans les chairs de la radioactivité gamma n’a pas permis de détecter de radionucléides artificiels, cependant du césium 137 a été mesuré dans les sédiments sur 2 sites. Le plutonium (émetteur alpha) est présent en faibles quantités dans les chairs....
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Ano: 2014 URL: http://archimer.ifremer.fr/doc/00249/35975/34499.pdf
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